I, too, am having this exact issue. Didn't attempt to deactivate crafting table 2, but i used both my old nether and End files, and then deleted and attempted again. Any help would be appreciated. Logs follow.
Log from server:
Chelicerate [/127.0.0.1:50711] logged in with entity id 264 at ([world] 165.28125, 12.0, 119.125)
2012-02-23 07:41:54 [iNFO] Chelicerate lost connection: disconnect.endOfStream
Log from appdata/roaming/.tecniclauncher/logs . Not sure how much of it is relevant, if more information is required from the log, i would be happy to paste it or upload it to dropbox, or something along those lines.
[07:30:05] [sEVERE] java.lang.NullPointerException
[07:30:05] [sEVERE] at aap.p(SourceFile:84)
[07:30:05] [sEVERE] at aap.c(SourceFile:63)
[07:30:05] [sEVERE] at ug.a(SourceFile:95)
[07:30:05] [sEVERE] at net.minecraft.client.Minecraft.a(Minecraft.java:554)
[07:30:05] [sEVERE] at wc.a(SourceFile:119)
[07:30:05] [sEVERE] at ug.a(SourceFile:72)
[07:30:05] [sEVERE] at ug.f(SourceFile:120)
[07:30:05] [sEVERE] at ug.i(SourceFile:108)
[07:30:05] [sEVERE] at net.minecraft.client.Minecraft.k(Minecraft.java:1332)
[07:30:05] [sEVERE] at net.minecraft.client.Minecraft.x(Minecraft.java:698)
[07:30:05] [sEVERE] at net.minecraft.client.Minecraft.run(Minecraft.java:638)
[07:30:05] [sEVERE] at java.lang.Thread.run(Unknown Source)
[07:31:00] [sEVERE] Railcraft Buildcraft Module 3.3.1: Buildcraft Detected, creating Tank Cart and Liquid Loader recipes.
[07:31:00] [sEVERE] Railcraft IC2 Module 3.3.1: IC2 Detected, creating MFE Cart and Energy Loader recipes.
[07:31:00] [sEVERE] (MAtmos : INFO) Update version found: 10
[07:31:01] [sEVERE] java.io.IOException: Bad packet id 235
[07:31:01] [sEVERE] at zu.a(SourceFile:141)
[07:31:01] [sEVERE] at kp.e(NetworkManager.java:145)
[07:31:01] [sEVERE] at kp.c(NetworkManager.java:267)
[07:31:01] [sEVERE] at qo.run(SourceFile:76)
[07:31:34] [sEVERE] ------------------------------------------