I get something similar, only when I'm in a specific area of my tower though. I have normal buildcraft and redpower2 pipes throughout the place, plus a bunch of IC2 machines. Also downstairs I have a bunch of beer fermenting. There are computers which have startup loops as well, but I have those in other places where the lag doesn't show up at all and I get >100 fps. First time posting for help, so if I forgot something let me know.
Modpack build: 3.1.1|1.2.5|latest
Operating system: Windows 7(x64)
Version of Java: jdk1.7.0_04
Problem: ~15 fps where normally I get >100 fps
Error messages: N/A (didn't see any?)
error log: http://pastebin.com/MifmepWU