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Can't run Tekkit server, throws an error when launching

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Have a VPS running Ubuntu 13.10-x86_64.

 

Running the server files located here: http://mirror.technicpack.net/Technic/servers/tekkitmain/Tekkit_Server_v1.2.9e.zip

 

Installing the update and generating a new world works fine, but the error is thrown when I place my world folders inside and run launch.sh (world, world_nether, world_the_end).

 

The error I receive is below, as well as the crash report.

2014-05-24 13:25:55 [INFO] [STDOUT] Loading Dimensional Doors save data...
2014-05-24 13:25:55 [INFO] [STDERR] java.io.EOFException: End of input at line 1 column 1
2014-05-24 13:25:55 [INFO] [STDERR]     at com.google.gson.stream.JsonReader.nextNonWhitespace(JsonReader.java:954)
2014-05-24 13:25:55 [INFO] [STDERR]     at com.google.gson.stream.JsonReader.nextValue(JsonReader.java:771)
2014-05-24 13:25:55 [INFO] [STDERR]     at com.google.gson.stream.JsonReader.peek(JsonReader.java:367)
2014-05-24 13:25:55 [INFO] [STDERR]     at com.google.gson.stream.JsonReader.expect(JsonReader.java:337)
2014-05-24 13:25:55 [INFO] [STDERR]     at com.google.gson.stream.JsonReader.beginArray(JsonReader.java:306)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.saving.BlacklistProcessor.createIntListFromJson(BlacklistProcessor.java:67)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.saving.BlacklistProcessor.createBlacklistFromJson(BlacklistProcessor.java:41)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.saving.BlacklistProcessor.readFromStream(BlacklistProcessor.java:27)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.saving.BlacklistProcessor.readFromStream(BlacklistProcessor.java:18)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.util.BaseConfigurationProcessor.readFromFile(BaseConfigurationProcessor.java:32)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.saving.DDSaveHandler.readBlacklist(DDSaveHandler.java:384)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.saving.DDSaveHandler.loadAll(DDSaveHandler.java:58)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.core.PocketManager.loadInternal(PocketManager.java:442)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.core.PocketManager.load(PocketManager.java:263)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.EventHookContainer.onWorldLoad(EventHookContainer.java:114)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraftforge.event.ASMEventHandler_26_EventHookContainer_onWorldLoad_Load.invoke(.dynamic)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraftforge.event.ASMEventHandler.invoke(ASMEventHandler.java:39)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraftforge.event.EventBus.post(EventBus.java:108)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraft.server.MinecraftServer.func_71247_a(MinecraftServer.java:259)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraft.server.dedicated.DedicatedServer.func_71197_b(DedicatedServer.java:187)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraft.server.MinecraftServer.run(MinecraftServer.java:445)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraft.server.ThreadMinecraftServer.run(SourceFile:583)
2014-05-24 13:25:55 [INFO] [STDERR] StevenDimDoors.mod_pocketDim.util.ConfigurationProcessingException: Could not read blacklist
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.saving.BlacklistProcessor.readFromStream(BlacklistProcessor.java:34)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.saving.BlacklistProcessor.readFromStream(BlacklistProcessor.java:18)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.util.BaseConfigurationProcessor.readFromFile(BaseConfigurationProcessor.java:32)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.saving.DDSaveHandler.readBlacklist(DDSaveHandler.java:384)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.saving.DDSaveHandler.loadAll(DDSaveHandler.java:58)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.core.PocketManager.loadInternal(PocketManager.java:442)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.core.PocketManager.load(PocketManager.java:263)
2014-05-24 13:25:55 [INFO] [STDERR]     at StevenDimDoors.mod_pocketDim.EventHookContainer.onWorldLoad(EventHookContainer.java:114)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraftforge.event.ASMEventHandler_26_EventHookContainer_onWorldLoad_Load.invoke(.dynamic)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraftforge.event.ASMEventHandler.invoke(ASMEventHandler.java:39)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraftforge.event.EventBus.post(EventBus.java:108)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraft.server.MinecraftServer.func_71247_a(MinecraftServer.java:259)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraft.server.dedicated.DedicatedServer.func_71197_b(DedicatedServer.java:187)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraft.server.MinecraftServer.run(MinecraftServer.java:445)
2014-05-24 13:25:55 [INFO] [STDERR]     at net.minecraft.server.ThreadMinecraftServer.run(SourceFile:583)
2014-05-24 13:25:55 [SEVERE] [Minecraft-Server] Encountered an unexpected exception NullPointerException
java.lang.NullPointerException
        at StevenDimDoors.mod_pocketDim.core.PocketManager.createAndRegisterBlacklist(PocketManager.java:697)
        at StevenDimDoors.mod_pocketDim.saving.DDSaveHandler.loadAll(DDSaveHandler.java:59)
        at StevenDimDoors.mod_pocketDim.core.PocketManager.loadInternal(PocketManager.java:442)
        at StevenDimDoors.mod_pocketDim.core.PocketManager.load(PocketManager.java:263)
        at StevenDimDoors.mod_pocketDim.EventHookContainer.onWorldLoad(EventHookContainer.java:114)
        at net.minecraftforge.event.ASMEventHandler_26_EventHookContainer_onWorldLoad_Load.invoke(.dynamic)
        at net.minecraftforge.event.ASMEventHandler.invoke(ASMEventHandler.java:39)
        at net.minecraftforge.event.EventBus.post(EventBus.java:108)
        at net.minecraft.server.MinecraftServer.func_71247_a(MinecraftServer.java:259)
        at net.minecraft.server.dedicated.DedicatedServer.func_71197_b(DedicatedServer.java:187)
        at net.minecraft.server.MinecraftServer.run(MinecraftServer.java:445)
        at net.minecraft.server.ThreadMinecraftServer.run(SourceFile:583)
2014-05-24 13:25:55 [SEVERE] [Minecraft-Server] This crash report has been saved to: /mc/./crash-reports/crash-2014-05-24_13.15.34-server.txt
2014-05-24 13:26:02 [INFO] [Buildcraft] Version check failed
2014-05-24 13:26:17 [INFO] [STDERR] java.io.IOException: Bad packet id 46
2014-05-24 13:26:17 [INFO] [STDERR]     at net.minecraft.network.packet.Packet.func_73272_a(Packet.java:149)
2014-05-24 13:26:17 [INFO] [STDERR]     at net.minecraft.network.TcpConnection.func_74447_i(TcpConnection.java:325)
2014-05-24 13:26:17 [INFO] [STDERR]     at net.minecraft.network.TcpConnection.func_74450_c(TcpConnection.java:549)
2014-05-24 13:26:17 [INFO] [STDERR]     at net.minecraft.network.TcpReaderThread.run(SourceFile:94)

The referenced crash report above can be viewed here: https://www.dropbox.com/s/p4w8ayc1eltmv4b/crash-2014-05-24_13.15.34-server.txt

 

Feel free to move if in the wrong forum, thanks for your time.

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