Found the problem again.
Multiverse is breaking the wireless receiver configuration.
After i created my worlds, did a bit of messing with the server configuration (changed the main world from world to world2). After that, my world1 was very slow(and server using almost 100% CPU). checked the log, getting spammed with NULL RECEIVER. Checked my nuclear central, the reactor was kaput. Patiently went to turn all the wireless stuff off, making the map a bit faster again.
Will delete(break the blocks) all wireless stuff, re-make the fresh install, create/import maps, restart, and then place the wireless stuff. Then leave all wireless system on, and then restart. After that will tp to another world, then reset, then back to the wireless world, then reset, then check if everything OK.
Edit:
Did not work. I dont know if it would work with some fresh new map.(2 at least, because with one only in multiverse, it was working fine until i imported another map.)
Will replace all transmitters/receivers with bundled/jacketed cables. at least one of these can transmit up to 16 colors of wire crammed into one.(yes, 16 signals of redstone through one cable)