Just a quick map I built, sorts out the drops from mining.
First, it:
->Recycles the crap (cobble, dirt, gravel, flint, marble, thaumcraft gems, sand and sandstone), into diamonds (through two mass fabricators).
Then it:
->Seperates the remainder into two groups; one for ores, and the others for materials such as gems, coal, uranium, lapis and diamonds.
Finally, it:
->Macerates the ores, smelts them, and puts them into a chest.
Inputs: 1, alchemical chest
Outputs: 3, alchemical chests, one for diamonds (from recycled crap), one for gems and other non-ore